Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932185.1_cds_XP_016478776.1_70386
CDS Infomation

[gene=LOC107800135] [db_xref=GeneID:107800135] [protein=probable trehalase] [protein_id=XP_016478776.1] [location=join(22876..23456,24358..24477,24868..24983,25145..25245,25339..25448,25545..25617,25697..25864,25956..26043,26135..26234,26332..26545,26755..26853)] [gbkey=CDS]
Sequence

ATGGCCATAATTGTTATGATTTTCACTCTGTTTATATTATCATTAACAGCAATGAATATG
ATTAAATCTGAAACATGTACATCTACTAACAAGGGACCTGTAATTCCAACAACCCCTTTA
GTTATTTTTCTTGAAAAAGTTCAAGAAGCTGCTCTTCAATCCTATGGCTACAAAGGGTTT
GATGCAAAACTATATGTTGACATGTCACTTAAACAGAATCTTTCAGCAACAGTTGAAGCT
TTTAATAAGCTTCCAAGAACTGTGAATGGTTCAATTCCAACACATGATTTGGATGTGTTT
ATAGGCAAATATTTGAATGGTGCAGATGAGGATTTGGTTTATGTTGAGCCAGTGGATTTT
GTTGCTGAGCCTGAAGTTTTTTTGCCAAAGGTGAAGAATTCTGAAGTGAGGGCTTGGGCA
TTGGAAGTGCATTCACTTTGGAAGAATTTAAGTAGGAAAGTTTCTGATCATGTATTGGAA
AATCCAGAGTTGTATACTTTAATTCCATTGAAAAATCCAGTTATTATAGCAGGATCGCGT
TACAGAGAGGTTTATTACTGGGATTCTTACTGGATAATAAGGGGCTTGTTAGCAAGCAAG
ATGTATGAAACTGCAAAAGGGATTGTGAGTAATCTGGTTTCTCTGATAGATCAATTCGGT
TATGTTCTTAATGGTGCACGAGCATACTACAGTAATAGAAGTCAGCCTCCTCTCCTGGCT
GCAATGATTGTTGAAATATACAACCGGACAGGCGATTTGGACTTGGTTAGAAGATCTCTT
CCTGCTTTGCTCAAAGAGTATCATTTTTGGAATTCAGGAATCCATAAAGTGACTATTCAA
GATGCTCAGGGATCGAACCATAGTTTGAGTCGATACTATGCTATGTGGAATGAACCCCGG
CCAGAATCATCAACTATTGACAGTAAAACAGCTTCCAAACTCCCAAATATCTGTGAGAAA
AGACAATTTTACCGTGAGTTGGCGTCAGCTGCTGAAAGTGGATGGGATTTCAGTTCAAGA
TGGATGAGGAATGAACCTGATCTCACAACAACTAGTACAACATCAATTCTACCAGTTGAT
CTGAATGCATTCCTTCTGAAGATGGAACTTGACGTAGCCTTTTTAGCAAATCTTGTTGGA
GATACTAGCATCGTTGCACGATTTACAGAAGCTTCTCAAAATAGACAAAGGGCCATCAAC
TGTATCTTTTGGAACGCGGAGATGGGGCAATGGCTTGATTACTGGCTTGGCAATAGTTAC
ACATCCGAGGATATTTATAAATGGGAAGATATACACCAGAACAAGAAGTCATTTGCCTCT
AACTTTGTTCCTTTGTGGATTGAATTATTCAATTCAGATGATATCACAACTCGAAAAGTT
GTTCAAAGTCTCGAGAACTCGGGCCTGCTTCAACCTGCAGGGATTGCAGGGACCTTGTCT
AATACTGGACAACAATGGGATTTTCCAAATGGTTGGCCCCCCATTCAACACATGATCATT
GAAGGTCTCGCGAGGTCTGGGCTAGAAGAGGCAAGAGCCTTAGCTAAAGACATTGTTATC
CGATGGATAAGAACGAACTATGTAGCTTACAAGAAAACCGGAGCAATGTATGAAAAATAT
GATGTGACAAAATGTGGAGCATACGGAGGTGGTGGTGTATATGTAGCCCAAACAGGTTTT
GGATGGGCGAATGGCGTTGTACTGGCACTTCTGGAGGAATTTGGATGGCCTGAAGACTTG
AAGATTGATACTACTGAGCAGGCAGAGTAA

Peptide Sequence

PEP ID

XP_016478776.1
PEP Infomation

PREDICTED: probable trehalase [Nicotiana tabacum]
Sequence

MAIIVMIFTLFILSLTAMNMIKSETCTSTNKGPVIPTTPLVIFLEKVQEAALQSYGYKGF
DAKLYVDMSLKQNLSATVEAFNKLPRTVNGSIPTHDLDVFIGKYLNGADEDLVYVEPVDF
VAEPEVFLPKVKNSEVRAWALEVHSLWKNLSRKVSDHVLENPELYTLIPLKNPVIIAGSR
YREVYYWDSYWIIRGLLASKMYETAKGIVSNLVSLIDQFGYVLNGARAYYSNRSQPPLLA
AMIVEIYNRTGDLDLVRRSLPALLKEYHFWNSGIHKVTIQDAQGSNHSLSRYYAMWNEPR
PESSTIDSKTASKLPNICEKRQFYRELASAAESGWDFSSRWMRNEPDLTTTSTTSILPVD
LNAFLLKMELDVAFLANLVGDTSIVARFTEASQNRQRAINCIFWNAEMGQWLDYWLGNSY
TSEDIYKWEDIHQNKKSFASNFVPLWIELFNSDDITTRKVVQSLENSGLLQPAGIAGTLS
NTGQQWDFPNGWPPIQHMIIEGLARSGLEEARALAKDIVIRWIRTNYVAYKKTGAMYEKY
DVTKCGAYGGGGVYVAQTGFGWANGVVLALLEEFGWPEDLKIDTTEQAE

Transcript Sequence

Gene sequence data has not been registered.